Browse of TCMCG017C04643 protein

CDS

Accession Number	TCMCG017C04643
gbkey	CDS
Protein Id	OMP08774.1
Location	complement(join(134855..134982,135219..135390,135471..135601,135871..136102,136189..136440,137057..137143,137223..137279,137664..137956,138119..138275,138356..138649,138901..139031,139110..139638,140200..140822,141528..141610,142201..142318,142402..142480,142690..142891,143434..143469,143934..144103))
GeneID	InterPro:IPR001890
Organism	Corchorus olitorius
locus_tag	COLO4_06153

Protein

Length	1257aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215141, BioSample:SAMN03160584
db_source	AWUE01012618.1
Definition	hypothetical protein COLO4_06153 [Corchorus olitorius]
Locus_tag	COLO4_06153

EGGNOG-MAPPER Annotation

COG_category	L
Description	Chloroplastic group IIA intron splicing facilitator CRS1
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0000372        [VIEW IN EMBL-EBI] GO:0000373        [VIEW IN EMBL-EBI] GO:0000375        [VIEW IN EMBL-EBI] GO:0000376        [VIEW IN EMBL-EBI] GO:0000377        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008380        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009532        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044435        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAAAAGCAAAGGCATTCACTGTTTTTGTACTTTCTTGTTGGTCTTTTTGTTTCTGGGTTTTCAAAATTGTGTTCAGGGAAGGTTGCTGGCATCATCAAAACCCGACAGGGATGATGCTGCTGCCTATGCTCGTTGGTTGGTGTCCCAGAATACTTGGGGAATTCTAAATACAATATCAAGTGAGTTGGATGGAGCGCCTTTTGGGAATGTTGTTTCATTTAGTGATGGGACACCTGATAAAAGTACTGGCATCCCGTATTTCTATTTGACAACCCTTGATCCAACAGCAAGAAATGCATTAAAAGACCAAAGGTCCTCACTCGCAATCAGCGAGTTTCCACTTGGAACTTGTGGCAACGCAGACCCAGAGAGCCCTGTTTGTGCAAAAATAACACTCACAGGAAAGTTGGTACTACTCGATGCAAACTCTAAAGAGGCGGAATTTGCTCAAACTGCTCTTTTCACAAAGCATCCAGAAATGAAGGGGTGGCCTAAGAGTCATAACTTTCAGATCTACAAATTGGAGATCGAGGACATATTTATGATCAATTGGTATGGTGGCCCTAAACCTCTAACAGTTGACCAGTACCTCAAATATAAAATGCATCATTTAGATCAGTATGCAATAGTTCCAAAGGCATCATTTACCTTTCAGGCATCATTGGCAGCAATGAATTTCTTATCAGCCAAATTCTTCGCCTTCCAATATCCTAAAACCCACAAAAAACCCCGCAAACAAATTTTCCTTATCCGGAGCTCCATAACCCCACCCGGAAACAAGACCCTTCCTCAATCCGCCATTCAGCGCATTGCTGACAAGCTTCGGTCTCTTGGATTCTCTGAAACCCAAAACGCCGAACCTGAATCCAAATCTGGGTCTGGGCCCGGCTCTGATTCTCCCGGAGAAATCTTTGTTCCGTTACCGCAGAAATTACCCAAGTACCGGGTTGGGCATACCATCGATACCAGCTGGAGCACGCCGGAGAATCCGGTTCCAGACCCGGGTTCGGGTCCGGGCAACTTGATGGTGAGGTTTAAGGAAATGAAGAGGGAGAGGAAGAAAGTGAGGGTGACGGAGGAGGACAGGGCGGTTCCAAGTCTGGCGGAGCTGACGCTGTCGAAGGCAGAGCTGAGGAGGTTGCAAACGTTGGGGATTGCTGAGGAAAGGAAGCTGAAGATTGGGAAAGCGGGCATTACGGAAGGAATTGTGAATGGGATTCATGAAAGGTGGAGAAGAAATGAGGTGGTTAGGATTGTTTGTGAAGATATTTGTAAAATGAATATGAAGAGGACTCATGAGGTTTTGGAGAGGAAGACAGGAGGGTTGGTGGTTTGGAGATCTGGAAGTAAAATCATATTGTATAGAGGGGCCGATTACAAGTATCCTTATTTCTCGGCTGATAAAATCGCAACAGATGACACTTCTTCCAATGCTTCACCAGTTACAGATATGGATAATGAGGAACTCCATGAAACAGAAAGCTGCTCATCTGATTCCACTGCTGCAAAAGCTGCTACACCAAATGCAACTGACAAAACGACTAAACCAATGATAGTTCAAGGTGTTGGTTCTCCAAATAGAGTACGATTTCAAATGCCAGGTGAGGCAGAACTTGTTGAAGAAGCTGACCGCTTGTTAGATGGACTGGGTCCAAGATTTAATGACTGGTGGGGTTATGAGCCTCTTCCGGTCGATGGTGATCTTCTACCTGCAGTTGTTCCAGGATACAGGAGACCCTTCCGCCTTCTTCCTTATGGTGTGAAGCCAATCCTGACAAATGATGAAATGACCACTTTAAGAAGACTTAGTCGACCCTTACCCTGTCATTTTGTGTTAGGAAGAAATAGAAAACTTCAGGGATTGGCTGCATCAATTGTCAAGCTCTGGGAAAAGTGTGAGATTGCCAAAATTGCCGTTAAGAGAGGAGTACAGAACACTAATAGTGAATTGATGGCACAAGAGTTAAAGTGGCTAACTGGAGGAACTTTGCTCGCACGAGATAAGGATTTCATTGTCTTATATAGGGGAAAAGATTTCCTGCCTTCTGCTGTTTCTTCTGCAATAGAAGAGCGGAGAAAGCATGGCACTGCTGGATGTAGTGAATCAAGGGAAGCTGCACAGGAGGTCAATGAGAACGCTACAAGTGGCTACCAAAAAAAAAGTAAAGGTTCCAAGGATGAGAGGAGTAATATCTTTGGTGGCCCGAAAAACATGAAGTCTGCTGAAGCAACTATTAAAAAGACACACACGAAGTTATCTATGGCCTTAGAGAAGAAAGAAAAGGCAGAGAAACTTCTGGCAGAGCTGGAGCAGGTAGATATCCCCCAACAACCTGATATTGATAAAGAGGGTATAACTGAAGAAGAAAGATATATGCTTAGGAAGGTTGGCTTGAGAATGAAGCCTTTCCTCCCATTAGGTAGACGGGGAGTATTTGATGGAACGGTTGAAAATATGCATCTTCACTGGAAGTATAGGGAACTTGTGAAGATCATTTCTAAGGATATAAATTTTGATGCTGTTTATCAAGTAGCACGGATGTTAGAGGCAGAAAGTGGTGGAATATTAGTGGCTGTCGAGAGAGTAAGTAAGGGCTATGCAATCATAGTTTATCGTGGGAAGAACTATGAGCGGCCTACTAGTCTGAGACCTCAGACACTTCTTACTAAGAGAGAGGCAATGAAGCGCTCTCTAGAGGAACAGCGTCGTAAGGTTGTAGACGAGGGGACAAACAACATGCAAACTGTTGAACAGTCAAGATTGCCAATGGACCAAGAAGAGCTGGAAATTTTGCAGTCAGTCAAGGACGCAACATCCGATATCGAATGCCCTGCATCTCCAAGAGGGCATGTAGAGGCTACCGGCAAAGGTAAATCCAAGTCGGTTTCCATAGAAAATGATAAGTCGGTTGCTGCAATAAGTATTCACCAACCCTCTGAACTAGAGCCTACAGAGCCATATTCTATGCATTATGGTATTGAGAATCATAAAACAGAATCTGAATCTTCATCCGAATCTGTGACCATAAAAAGAGATGCACCTGAACTGAGGACGTTGCATACTGAAGTGGAAATAGTTGACTCCACATCTTTTCCTGATAACGTTGGGGAAGAAATAGACTATTCTGGTGCTGTTAATGCTGAGGACTGTATTTCCAATAATGGGTCAATGGAATCATTGATGGAATCAGCCAACGATAGATTGCATGTTTCAAATTCATCAATGGATGAAAATGTGTCGAATAAGATGGCTTCAACAGCAAAGTTTCTTTCTAACAAAGACAGACTTCTCTTACGAAAGCAGGCTCTCAAAATGAAGAAACGCCCTCTGCTCGCAATTGGGAGGAGCAACAGTGTGACTGGTCTCGCAAAAGCAATCAAGGCACACTTTCAGAAGCATCCTCTTGTTATAGTTAATGTGAAAGGGAGGGCTAAAGGGACTTCCGTGCAGGAGGTGGTGCTAAAGCTTCAGGAAGCCACAGGTGCAATTCTAGTTTCTCAGGAACCTAGTAAAGTCATACTGTATCGAGGTTGGGGTGCAGGAGATGGAGTAGTCCGTGGTCATAAAAAGAATGCAAAAGATGCATCAATTCAGAATCGGCCTGCAGTTTCCCCTGAGCTTATTGCAGCAATCAAACTTGAATGTGGTTCTAGGAGTAGCAAGCAGATATACACATCATTCTTCAATCTTCAATGTGAGGACACTGGTTTGGATCAAATGGTCTTGATGCCCCTCACAGCATTCTGCAGATGTTTGATCAAGCTGTCTTGA

Protein:   MKSKGIHCFCTFLLVFLFLGFQNCVQGRLLASSKPDRDDAAAYARWLVSQNTWGILNTISSELDGAPFGNVVSFSDGTPDKSTGIPYFYLTTLDPTARNALKDQRSSLAISEFPLGTCGNADPESPVCAKITLTGKLVLLDANSKEAEFAQTALFTKHPEMKGWPKSHNFQIYKLEIEDIFMINWYGGPKPLTVDQYLKYKMHHLDQYAIVPKASFTFQASLAAMNFLSAKFFAFQYPKTHKKPRKQIFLIRSSITPPGNKTLPQSAIQRIADKLRSLGFSETQNAEPESKSGSGPGSDSPGEIFVPLPQKLPKYRVGHTIDTSWSTPENPVPDPGSGPGNLMVRFKEMKRERKKVRVTEEDRAVPSLAELTLSKAELRRLQTLGIAEERKLKIGKAGITEGIVNGIHERWRRNEVVRIVCEDICKMNMKRTHEVLERKTGGLVVWRSGSKIILYRGADYKYPYFSADKIATDDTSSNASPVTDMDNEELHETESCSSDSTAAKAATPNATDKTTKPMIVQGVGSPNRVRFQMPGEAELVEEADRLLDGLGPRFNDWWGYEPLPVDGDLLPAVVPGYRRPFRLLPYGVKPILTNDEMTTLRRLSRPLPCHFVLGRNRKLQGLAASIVKLWEKCEIAKIAVKRGVQNTNSELMAQELKWLTGGTLLARDKDFIVLYRGKDFLPSAVSSAIEERRKHGTAGCSESREAAQEVNENATSGYQKKSKGSKDERSNIFGGPKNMKSAEATIKKTHTKLSMALEKKEKAEKLLAELEQVDIPQQPDIDKEGITEEERYMLRKVGLRMKPFLPLGRRGVFDGTVENMHLHWKYRELVKIISKDINFDAVYQVARMLEAESGGILVAVERVSKGYAIIVYRGKNYERPTSLRPQTLLTKREAMKRSLEEQRRKVVDEGTNNMQTVEQSRLPMDQEELEILQSVKDATSDIECPASPRGHVEATGKGKSKSVSIENDKSVAAISIHQPSELEPTEPYSMHYGIENHKTESESSSESVTIKRDAPELRTLHTEVEIVDSTSFPDNVGEEIDYSGAVNAEDCISNNGSMESLMESANDRLHVSNSSMDENVSNKMASTAKFLSNKDRLLLRKQALKMKKRPLLAIGRSNSVTGLAKAIKAHFQKHPLVIVNVKGRAKGTSVQEVVLKLQEATGAILVSQEPSKVILYRGWGAGDGVVRGHKKNAKDASIQNRPAVSPELIAAIKLECGSRSSKQIYTSFFNLQCEDTGLDQMVLMPLTAFCRCLIKLS